Calificación Moto3 - Gran Premio de España 2016
| Pos. | Piloto | Equipo | Moto | Tiempo |
|---|---|---|---|---|
| 1 | 
Nicolo Bulega |
SKY Racing Team VR46 | KTM | 1:46.223 |
| 2 | 
Jorge Navarro |
Estrella Galicia 0,0 | Honda | +0.455 |
| 3 |
Francesco Bagnaia |
ASPAR Mahindra Team Moto3 | Mahindra | +0.457 |
| 4 |
Niccolo Antonelli |
Ongetta-Rivacold | Honda | +0.482 |
| 5 |
Enea Bastianini |
Gresini Racing Moto3 | Honda | +0.604 |
| 6 |
Joan Mir |
Leopard Racing | KTM | +0.739 |
| 7 |
Juanfran Guevara |
RBA Racing Team | KTM | +0.744 |
| 8 |
Romano Fenati |
SKY Racing Team VR46 | KTM | +0.849 |
| 9 | 
Jakub Kornfeil |
Drive M7 SIC Racing Team | Honda | +0.908 |
| 10 |
Arón Canet |
Estrella Galicia 0,0 | Honda | +0.931 |
| 11 | 
Fabio Quartararo |
Leopard Racing | KTM | +1.048 |
| 12 | 
Philipp Oettl |
Schedl GP Racing | KTM | +1.053 |
| 13 |
Adrián Martín |
MAPFRE Team MAHINDRA | Mahindra | +1.058 |
| 14 |
Jules Danilo |
Ongetta-Rivacold | Honda | +1.102 |
| 15 |
Albert Arenas |
Peugeot MC Saxo | Albert Arenas | +1.138 |
| 16 |
Andrea Migno |
SKY Racing Team VR46 | KTM | +1.174 |
| 17 | 
Bo Bendsneyder |
Red Bull KTM Ajo | KTM | +1.305 |
| 18 | 
Hiroki Ono |
Honda Team Asia | Honda | +1.357 |
| 19 | 
Livio Loi |
RW Racing GP BV | Honda | +1.395 |
| 20 |
Tatsuki Suzuki |
CIP | Mahindra | +1.431 |
| 21 |
Fabio Di Giannantonio |
Gresini Racing Moto3 | Honda | +1.511 |
| 22 | 
Gabriel Rodrigo |
RBA Racing Team | KTM | +1.513 |
| 23 | 
Khairul Idham Pawi |
Honda Team Asia | Honda | +1.517 |
| 24 | 
John Mcphee |
SaxoPrint RTG | Peugeot | +1.523 |
| 25 |
Karel Hanika |
Platinum Bay Real Estate | Mahindra | +1.607 |
| 26 |
Andrea Locatelli |
Leopard Racing | KTM | +1.755 |
| 27 |
Adam Norrodin |
Drive M7 SIC Racing Team | Honda | +1.802 |
| 28 |
Davide Pizzoli |
Procercasa - 42 Motorsport | KTM | +1.867 |
| 29 |
Alexis Masbou |
Peugeot MC Saxo | Albert Arenas | +2.208 |
| 30 | 
Darryn Binder |
Platinum Bay Real Estate | Mahindra | +2.276 |
| 31 |
Lorenzo Petrarca |
3570 Team Italia | Stefano Valtulini | +2.372 |
| 32 |
María Herrera |
Team Laglisse | Honda | +3.022 |
| 33 |
Fabio Spiranelli |
CIP | Mahindra | +3.357 |
| 35 |
Stefano Valtulini |
3570 Team Italia | Stefano Valtulini | +0.000 |
| 36 |
Brad Binder |
Red Bull KTM Ajo | KTM | +0.213 |